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@ -92,6 +92,8 @@ int meanshift(double **original_points, double ***shifted_points, int deviation |
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printf("%s wall clock time = %f\n","Device memory allocation", seq); |
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// to create output data file |
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// printf("%f ", seq); |
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} |
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// finds pairwise distance matrix (inside radius) |
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@ -103,8 +105,19 @@ int meanshift(double **original_points, double ***shifted_points, int deviation |
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calculate_denominator(d_kernel_matrix, d_denominator, &denominator); |
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size = NUMBER_OF_POINTS * sizeof(double); |
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// tic |
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gettimeofday (&start, NULL); |
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gpuErrchk( cudaMemcpy(d_denominator.elements, &(denominator[0]) |
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, size, cudaMemcpyHostToDevice) ); |
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// toc |
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gettimeofday (&end, NULL); |
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seq = (double)((end.tv_usec - start.tv_usec)/1.0e6 + end.tv_sec - start.tv_sec); |
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printf("%s wall clock time = %f\n","Device memory allocation", seq); |
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// to create output data file |
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// printf("%f ", seq); |
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// creates new y vector |
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// allocates memory in every recursion |
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@ -229,8 +242,20 @@ void calculate_kernel_matrix(Matrix d_shifted_points, Matrix d_original_points, |
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} |
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size = NUMBER_OF_POINTS * NUMBER_OF_POINTS * sizeof(double); |
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// tic |
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gettimeofday (&start, NULL); |
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gpuErrchk( cudaMemcpy(&((*kernel_matrix)[0][0]), d_kernel_matrix.elements |
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, size, cudaMemcpyDeviceToHost) ); |
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// toc |
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gettimeofday (&end, NULL); |
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seq = (double)((end.tv_usec - start.tv_usec)/1.0e6 + end.tv_sec - start.tv_sec); |
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printf("%s wall clock time = %f\n","Copying from device to host", seq); |
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// to create output data file |
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// printf("%f ", seq); |
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} |
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void calculate_denominator(Matrix d_kernel_matrix, Matrix d_denominator, double **denominator){ |
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@ -265,8 +290,20 @@ void calculate_denominator(Matrix d_kernel_matrix, Matrix d_denominator, double |
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} |
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size = NUMBER_OF_POINTS * sizeof(double); |
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// tic |
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gettimeofday (&start, NULL); |
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gpuErrchk( cudaMemcpy(&((*denominator)[0]), d_denominator.elements |
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, size, cudaMemcpyDeviceToHost) ); |
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// toc |
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gettimeofday (&end, NULL); |
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seq = (double)((end.tv_usec - start.tv_usec)/1.0e6 + end.tv_sec - start.tv_sec); |
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printf("%s wall clock time = %f\n","Copying from device to host", seq); |
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// to create output data file |
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// printf("%f ", seq); |
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} |
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void shift_points(Matrix d_kernel_matrix, Matrix d_original_points, Matrix d_shifted_points, |
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@ -305,10 +342,24 @@ void shift_points(Matrix d_kernel_matrix, Matrix d_original_points, Matrix d_shi |
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} |
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size = NUMBER_OF_POINTS * DIMENSIONS * sizeof(double); |
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// tic |
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gettimeofday (&start, NULL); |
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gpuErrchk( cudaMemcpy(&((*new_shift)[0][0]), d_new_shift.elements |
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, size, cudaMemcpyDeviceToHost) ); |
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gpuErrchk( cudaMemcpy(&((*mean_shift_vector)[0][0]), d_mean_shift_vector.elements |
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, size, cudaMemcpyDeviceToHost) ); |
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// toc |
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gettimeofday (&end, NULL); |
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seq = (double)((end.tv_usec - start.tv_usec)/1.0e6 + end.tv_sec - start.tv_sec); |
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printf("%s wall clock time = %f\n","Copying from device to host", seq); |
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// to create output data file |
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// printf("%f ", seq); |
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} |
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void free_device_memory(Matrix d_original_points, Matrix d_kernel_matrix, Matrix d_denominator, |
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