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285 lines
6.8 KiB
285 lines
6.8 KiB
/*
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bitonic.c
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This file contains two different implementations of the bitonic sort
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recursive version : recBitonicSort()
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imperative version : impBitonicSort()
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The bitonic sort is also known as Batcher Sort.
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For a reference of the algorithm, see the article titled
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Sorting networks and their applications by K. E. Batcher in 1968
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The following codes take references to the codes avaiable at
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http://www.cag.lcs.mit.edu/streamit/results/bitonic/code/c/bitonic.c
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http://www.tools-of-computing.com/tc/CS/Sorts/bitonic_sort.htm
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http://www.iti.fh-flensburg.de/lang/algorithmen/sortieren/bitonic/bitonicen.htm
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*/
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/*
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------- ----------------------
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Nikos Pitsianis, Duke CS
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-----------------------------
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*/
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#include <stdio.h>
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#include <stdlib.h>
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#include <time.h>
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#include <sys/time.h>
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#include <omp.h>
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typedef enum { false, true } bool;
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struct timeval startwtime, endwtime;
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double seq_time;
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int threads; //number of threads
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int N; // data array size
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int *a; // data array to be sorted
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unsigned randSeed; //seed array initialisation
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bool sortPass; //flag showing whether the test passed or not
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const int ASCENDING = 1;
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const int DESCENDING = 0;
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//min lenght of an array to be sorted by bitonicMerge in parallel manner
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const int REC_BITONIC_MERGE_PARALLEL_COMPARE_MIN = (1 << 12) - 1;
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//min lenght of an array to be merged by bitonicMerge in parallel manner
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const int REC_BITONIC_MERGE_PARALLEL_CALL_MIN = (1 << 8) - 1;
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//min lenght of an array to be sorted in parallel manner
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const int REC_BITONIC_SORT_PARALLEL_MIN = (1 << 22) + 1;
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void getArgs(int argc, char** argv);
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void init(void);
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void print(void);
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void sort(void);
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void test(void);
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void qSortTest(void);
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void exchange(int i, int j);
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void compare(int i, int j, int dir);
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void bitonicMerge(int lo, int cnt, int dir);
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void recBitonicSort(int lo, int cnt, int dir);
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void impBitonicSort(void);
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int qSortAscendingCompFuncWithTest (const void * a, const void * b);
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int qSortAscending (const void * a, const void * b);
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int qSortDescending (const void * a, const void * b);
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/** the main program **/
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int main(int argc, char **argv) {
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getArgs(argc, argv);
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a = (int *) malloc(N * sizeof(int));
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randSeed = (unsigned) time(NULL);
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omp_set_dynamic(0);
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omp_set_num_threads(threads);
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//Sorts using the qSort algorithm
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init();
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gettimeofday (&startwtime, NULL);
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qsort(a, N, sizeof(int), qSortAscending);
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gettimeofday (&endwtime, NULL);
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seq_time = (double)((endwtime.tv_usec - startwtime.tv_usec)/1.0e6
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+ endwtime.tv_sec - startwtime.tv_sec);
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printf("qSort wall clock time = %f\n\n", seq_time);
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//Sorts using the recursive bitonic algorithm
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init();
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gettimeofday (&startwtime, NULL);
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sort();
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gettimeofday (&endwtime, NULL);
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seq_time = (double)((endwtime.tv_usec - startwtime.tv_usec)/1.0e6
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+ endwtime.tv_sec - startwtime.tv_sec);
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printf("\nRecursive wall clock time = %f\n", seq_time);
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test();
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qSortTest();
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free(a);
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}
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/** -------------- SUB-PROCEDURES ----------------- **/
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void getArgs(int argc, char** argv){
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if (argc != 3) {
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printf("Usage: %s p q\nwhere:\n\tP=2^p is the the number of threads(power of two)\n\tN=2^q is problem size (power of two)\n",
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argv[0]);
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exit(1);
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}
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threads = 1<<atoi(argv[1]);
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N = 1<<atoi(argv[2]);
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}
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/** procedure test() : verify sort results **/
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void test() {
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int pass = 1;
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int i;
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for (i = 1; i < N; i++) {
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pass &= (a[i-1] <= a[i]);
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}
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printf("\tTEST\t\t%s\n",(pass) ? "PASSed" : "FAILed");
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}
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/** procedure qSortTest() : verify sort results using qsort method **/
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void qSortTest(){
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sortPass = true;
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qsort(a, N, sizeof(int), qSortAscendingCompFuncWithTest);
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printf("\tQSORT TEST\t%s\n",(sortPass) ? "PASSed" : "FAILed");
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}
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/** procedure init() : initialize array "a" with data **/
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void init() {
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srand(randSeed);
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int i;
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for (i = 0; i < N; i++) {
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a[i] = rand() % N; // (N - i);
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}
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}
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/** procedure print() : print array elements **/
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void print() {
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int i;
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for (i = 0; i < N; i++) {
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printf("%d\n", a[i]);
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}
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printf("\n");
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}
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/** INLINE procedure exchange() : pair swap **/
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inline void exchange(int i, int j) {
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int t;
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t = a[i];
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a[i] = a[j];
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a[j] = t;
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}
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/** procedure compare()
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The parameter dir indicates the sorting direction, ASCENDING
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or DESCENDING; if (a[i] > a[j]) agrees with the direction,
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then a[i] and a[j] are interchanged.
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**/
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inline void compare(int i, int j, int dir) {
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if (dir==(a[i]>a[j]))
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exchange(i,j);
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}
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/** Procedure bitonicMerge()
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It recursively sorts a bitonic sequence in ascending order,
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if dir = ASCENDING, and in descending order otherwise.
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The sequence to be sorted starts at index position lo,
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the parameter cbt is the number of elements to be sorted.
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**/
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void bitonicMerge(int lo, int cnt, int dir) {
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if (cnt>1) {
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int k=cnt/2;
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int i;
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if (cnt > REC_BITONIC_MERGE_PARALLEL_COMPARE_MIN){
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#pragma omp parallel for
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for (i=lo; i<lo+k; i++)
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compare(i, i+k, dir);
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} else {
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for (i=lo; i<lo+k; i++){
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compare(i, i+k, dir);
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}
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}
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if (cnt > REC_BITONIC_MERGE_PARALLEL_CALL_MIN){
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#pragma omp parallel sections
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{
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#pragma omp section
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{
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bitonicMerge(lo, k, dir);
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}
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#pragma omp section
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{
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bitonicMerge(lo+k, k, dir);
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}
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}
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} else {
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bitonicMerge(lo, k, dir);
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bitonicMerge(lo+k, k, dir);
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}
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}
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}
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/** function recBitonicSort()
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first produces a bitonic sequence by recursively sorting
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its two halves in opposite sorting orders, and then
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calls bitonicMerge to make them in the same order
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**/
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void recBitonicSort(int lo, int cnt, int dir) {
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if (cnt>1) {
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int k=cnt/2;
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#pragma omp task
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{
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recBitonicSort(lo, k, ASCENDING);
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}
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#pragma omp task
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{
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recBitonicSort(lo+k, k, DESCENDING);
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}
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#pragma omp taskwait
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bitonicMerge(lo, cnt, dir);
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}
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}
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/** function sort()
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Caller of recBitonicSort for sorting the entire array of length N
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in ASCENDING order
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**/
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void sort() {
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#pragma omp parallel num_threads(threads)
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#pragma omp single nowait
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recBitonicSort(0, N, ASCENDING);
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}
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/*
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imperative version of bitonic sort
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*/
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void impBitonicSort() {
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int i,j,k;
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for (k=2; k<=N; k=2*k) {
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for (j=k>>1; j>0; j=j>>1) {
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#pragma omp parallel for num_threads(threads)
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for (i=0; i<N; i++) {
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int ij=i^j;
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if ((ij)>i) {
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if ((i&k)==0 && a[i] > a[ij])
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exchange(i,ij);
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if ((i&k)!=0 && a[i] < a[ij])
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exchange(i,ij);
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}
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}
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}
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}
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}
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/** function used by qsort for comparing as well as testing **/
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int qSortAscendingCompFuncWithTest (const void * a, const void * b) {
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int result = ( *(int*)a - *(int*)b );
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if (result > 0){
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sortPass = false;
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}
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return result;
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}
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/** function used by qsort for comparing **/
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int qSortAscending (const void * a, const void * b) {
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return ( *(int*)a - *(int*)b );
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}
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/** function used by qsort for comparing **/
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int qSortDescending (const void * a, const void * b) {
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return ( *(int*)b - *(int*)a );
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}
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