iteration refactor

testers/iteration.c

@@ -0,0 +1,51 @@
+void iteration (int number_of_iterations, int NUMBER_OF_POINTS, int DIMENSIONS, int h){
+
+    for (int iter=0; iter < number_of_iterations; iter++){
+        double accum =0;
+        for (int i =0; i< NUMBER_OF_POINTS; i++){
+            for (int j=0; j< NUMBER_OF_POINTS; j++){
+                //calculate distance between vectors x, y
+                double sum=0;
+                double dif;
+                for (int k=0; k < DIMENSIONS; k++){
+                    // TODO CHANGE NAMES
+                    dif = y[k]-x[k];
+                    sum += dif*dif;
+                }
+                double distance = sqrt(sum);
+                // 2 sparse array
+                if (distance < h){
+                    kernel_matrix[i][j] = dist;
+                }else{
+                    kernel_matrix[i][j] = 0;
+                }
+                if (kernel_matrix[i][j]!=0){
+                    kernel_matrix[i][j] = kernel_matrix[i][j]*kernel_matrix[i][j];
+                    double pow = ((-1)*(kernel_matrix[i][j]))/(2*(h*h));
+                    kernel_matrix[i][j] = exp(pow);
+                }
+                if (i==j){
+                    kernel_matrix[i][j] = kernel_matrix[i][j] +1;
+                }
+                accum = accum + kernel_matrix[i][j];
+            }
+            denominator[i] = accum;
+
+            for (int j =0; j < DIMENSIONS;j++){
+                new_shift[i][j]=0;
+                for (int k=0; k<NUMBER_OF_POINTS; k++){
+                    new_shift[i][j] += kernel_matrix[i][k] * original_points[k][j];
+                }
+                new_shift[i][j] = new_shift[i][j] / denominator[i];
+                mean_shift_vector[i][j] = new_shift[i][j] - (*shifted_points)[i][j];
+            }
+        }
+        // frees previously shifted points, they're now garbage
+        free((*shifted_points)[0]);
+        // updates shifted points pointer to the new array address
+        shifted_points = &new_shift;
+        
+
+    }// iteration end
+
+}